Development of a sensitive and quantitative assay for spring viremia of carp virus based on real-time RT-PCR-长江水产研究所 长江水产研究所
网站首页 机构简介 新闻动态 科研进展 疫病信息 病害图鉴 疫病诊断 防控技术 安全用药 联系我们 专家介绍 在线留言
资料搜索
 
Development of a sensitive and quantitative assay for spring viremia of carp virus based on real-time RT-PCR

---来源于:
Development of a sensitive and quantitative assay for spring viremia of carp virus based on real-time RT-PCR
A one-step real-time reverse transcription-polymerase chain reaction (RT-PCR) using a TaqMan probe to quantitatively detect spring viremia of carp virus (SVCV) is described. In this assay, a pair of primers amplifying an 81-bp DNA fragment and a TaqMan probe was designed targeting the conserved region at the SVCV glycoprotein (G) gene. To avoid the disadvantages arising from plasmids, an extension adding a T7 phage polymerase promoter to the 5’ end of the antisense primer was carried out to obtain viral cRNA. Standardized cycle threshold (Ct) values for 10-fold serial dilutions of SVCV cRNA were achieved by real-time RT-PCR and used to create standard curves. A regression line between the mean Ct values and viral template concentrations over a 1:107 dilution range with an r2 value (0.9916) and a slope (-3.36) and the coefficient of variation (intra- or inter-assay is <2% and <4%, respectively) indicated that the assay was highly reproducible. The assay was specific to SVCV and there was no cross-reactivity with other fish viruses (viral hemorrhagic septicemia virus, VHSV infectious pancreatic necrosis virus, IPNV grass carp reovirus, GCRV epizootic haematopoietic necrosis virus, EHNV). The standard curve allows precise absolute quantitation and shows that the detection limit of the assay is 40 copies of the viral RNA. This one-step RT-PCR assay was evaluated using 60 clinical common carp samples collected during the year 2006, indicating such technology offers considerable advantages over conventional RT-PCR methods in current routine use for SVCV surveillance. This is the first report of the development of a one-step TaqMan® RT-PCR for SVCV detection. Journal of Virological Methods 152 (2008) 43–48. Zhiqin Yuea,, Yong Teng, Chengzhu Liang, Xiayang Xie, Biao Xua, Laihua Zhu,Zhiwen Lei, Junqiang He, Zongxiao Liu, Yulin Jiang, Hong Liu, Qiwei Qin.( Shandong Entry-Exit Inspection and Quarantine Bureau, No. 1 Tuandao Er Road, Qingdao 266002, China State Key Laboratory of Biocontrol, College of Life Sciences, SunYat-Sen (Zhongshan) University, 135 West Xingang Road, Guangzhou 510275, China The Key Lab of Aquatic Animal Diseases, Shenzhen Exit & Entry Inspection and Quarantine Bureau, 2049 Heping Road, Shenzhen 518001, China Medical College of Georgia, Augusta, GA 30912, USA).
日期:2010-07-14 阅读:次
新闻动态
长江水产研究所鱼病室成员赴河南师范大
长江所鱼病室在安徽蚌埠开展中华鳖病害
国家大宗淡水鱼产业技术体系病毒病防控
加拿大爱德华王子岛大学蔡文龙博士后访
长江所鱼病室“鲫鱼养殖场疫病传入途径
疫病信息
养殖鲫鱼出血病
天津2011年5月份水产病害预测预报
河北省2011年5月份水产病害预测预报
如 何 尽 早 发 现 鱼 病
几种突发性大批量死鱼现象的判断
防控技术
·  草鱼出血病的诊断与防治方法
·  大鲵人工养殖技术及日常疾病的防治
·  七月气温逐渐升高 水产养殖注意事项
·  淡水鱼镰刀菌病的防治
·  泥鳅养殖如何预防疾病
邮箱入口

Copyright © 2009-2010  农业部长江流域水生动物疫病重点实验室中国水产科学研究院长江水产研究所鱼类病害研究室版权所有
备案号:黑ICP备09058839号Forex 您是本站第位访问者!